STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_4Putative aliphatic sulfonates transport permease protein SsuC. (262 aa)    
Predicted Functional Partners:
OIQ51412.1
NMT1/THI5 like protein.
 
 
 0.993
tauB_2
Taurine import ATP-binding protein TauB.
 
 0.992
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 0.976
cmpD
Bicarbonate transport ATP-binding protein CmpD.
 
 0.974
ssuA_2
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.968
tauB_1
Taurine import ATP-binding protein TauB.
 
 0.963
ssuA_3
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.959
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.928
OIQ49209.1
Putative thiamine biosynthesis protein.
 
 
 0.910
potB_4
Spermidine/putrescine transport system permease protein PotB.
  
  
  0.833
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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