STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ51465.1Phenylacetate-coenzyme A ligase. (429 aa)    
Predicted Functional Partners:
rebM_2
Demethylrebeccamycin-D-glucose O-methyltransferase.
 
  
 0.952
OIQ51463.1
Putative redox-active protein; C_GCAxxG_C_C.
 
    0.947
OIQ51461.1
Hypothetical protein.
 
     0.940
preT_2
NAD-dependent dihydropyrimidine dehydrogenase subunit PreT.
 
     0.932
moaA_12
Cyclic pyranopterin monophosphate synthase.
 
     0.925
mocA
Molybdenum cofactor cytidylyltransferase.
 
     0.884
pucA
Putative xanthine dehydrogenase subunit A.
     0.883
mop_3
Aldehyde oxidoreductase.
 
   
 0.856
pspA_2
Phosphoserine phosphatase 1.
       0.780
sauT
Putative sulfoacetate--CoA ligase.
   
 0.759
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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