STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ48953.1SirA-like protein. (204 aa)    
Predicted Functional Partners:
nifS
Cysteine desulfurase.
   
 0.973
OIQ49945.1
Hypothetical protein.
  
 
 0.966
OIQ50028.1
Hypothetical protein.
 
  
 0.859
thiS
Sulfur carrier protein ThiS.
   
 0.857
fldC
R-phenyllactate dehydratase beta subunit.
 
    0.856
OIQ51772.1
ThiS family protein.
   
 0.848
OIQ50763.1
MoaE protein.
 
  
 0.834
glpE_1
Thiosulfate sulfurtransferase GlpE.
  
 
 0.824
thiI
tRNA sulfurtransferase.
 
  
 0.819
selB
Selenocysteine-specific elongation factor.
 
   
 0.814
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.