STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424945_01400Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_000424945_07846
Unannotated protein.
  
     0.639
GCA_000424945_00624
Unannotated protein.
  
     0.633
GCA_000424945_00556
Unannotated protein.
  
  
 0.587
GCA_000424945_00634
Unannotated protein.
 
     0.584
GCA_000424945_07720
Unannotated protein.
 
     0.578
GCA_000424945_00621
Unannotated protein.
  
     0.575
GCA_000424945_04724
Unannotated protein.
     
  0.499
GCA_000424945_06658
Unannotated protein.
  
     0.497
GCA_000424945_01120
Unannotated protein.
  
     0.493
GCA_000424945_00080
Unannotated protein.
  
     0.460
Your Current Organism:
Streptomyces sp. 142MFCol31
NCBI taxonomy Id: 1172179
Other names: S. sp. 142MFCol3.1, Streptomyces sp. 142MFCol3.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.