STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424945_03552Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_000424945_04660
Unannotated protein.
  
 
 0.967
GCA_000424945_08419
Unannotated protein.
 
   0.966
GCA_000424945_04683
Unannotated protein.
   
   0.962
GCA_000424945_07653
Unannotated protein.
   
 
 0.962
GCA_000424945_08233
Unannotated protein.
   
   0.962
GCA_000424945_08237
Unannotated protein.
  
   0.962
GCA_000424945_08400
Unannotated protein.
   
 
 0.961
GCA_000424945_08410
Unannotated protein.
   
   0.960
GCA_000424945_08411
Unannotated protein.
   
   0.960
GCA_000424945_06090
Unannotated protein.
  
    0.804
Your Current Organism:
Streptomyces sp. 142MFCol31
NCBI taxonomy Id: 1172179
Other names: S. sp. 142MFCol3.1, Streptomyces sp. 142MFCol3.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.