STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424945_04132Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_000424945_04133
Unannotated protein.
 
     0.930
GCA_000424945_04134
Unannotated protein.
       0.674
GCA_000424945_08002
Unannotated protein.
    
 
 0.609
GCA_000424945_05514
Unannotated protein.
  
 
 0.571
GCA_000424945_02793
Unannotated protein.
 
     0.543
GCA_000424945_04137
Unannotated protein.
 
     0.490
GCA_000424945_08557
Unannotated protein.
 
     0.474
Your Current Organism:
Streptomyces sp. 142MFCol31
NCBI taxonomy Id: 1172179
Other names: S. sp. 142MFCol3.1, Streptomyces sp. 142MFCol3.1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.