STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383535_03249Unannotated protein. (416 aa)    
Predicted Functional Partners:
GCA_000383535_03250
Unannotated protein.
       0.685
GCA_000383535_01357
Unannotated protein.
  
 
   0.474
GCA_000383535_00824
Unannotated protein.
  
  
 0.463
GCA_000383535_03251
Unannotated protein.
       0.463
GCA_000383535_04250
Unannotated protein.
      
 0.432
GCA_000383535_01561
Unannotated protein.
  
    0.428
GCA_000383535_01931
Unannotated protein.
  
     0.427
GCA_000383535_05258
Unannotated protein.
  
     0.415
GCA_000383535_00948
Unannotated protein.
  
     0.409
Your Current Organism:
Nocardia sp. 348MFTsu51
NCBI taxonomy Id: 1172185
Other names: N. sp. 348MFTsu5.1, Nocardia sp. 348MFTsu5.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.