STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB40322.1Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (594 aa)    
Predicted Functional Partners:
EQB35541.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family.
 
 0.994
EQB34327.1
Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.972
EQB39792.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family.
 
 
 0.958
EQB39596.1
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.926
EQB39593.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.925
EQB40330.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.909
EQB34326.1
Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.878
rlpA
Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
 0.864
engB
GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.831
hisB
Imidazoleglycerol-phosphate dehydratase; Catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.830
Your Current Organism:
Sulfurimonas hongkongensis
NCBI taxonomy Id: 1172190
Other names: DSM 22096, JCM 18418, S. hongkongensis, Sulfurimonas sp. AST-10, strain AST-10
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