STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WQQ_03870Hypothetical protein. (125 aa)    
Predicted Functional Partners:
WQQ_18620
Hypothetical protein.
 
 
 0.981
WQQ_05520
Hypothetical protein.
 
 
 0.971
WQQ_25630
Hypothetical protein.
 
 0.960
WQQ_21590
Sensor histidine kinase/response regulator.
   
 0.945
WQQ_09930
Hypothetical protein.
  
 0.929
WQQ_41070
Hypothetical protein.
 
 
 0.909
WQQ_26020
Hypothetical protein.
  
 0.869
WQQ_13200
Hypothetical protein.
  
 0.867
WQQ_07930
Hypothetical protein.
  
 0.866
WQQ_39210
Hypothetical protein.
 
 
 0.864
Your Current Organism:
Hydrocarboniphaga effusa
NCBI taxonomy Id: 1172194
Other names: H. effusa AP103, Hydrocarboniphaga effusa AP103, Hydrocarboniphaga effusa ATCC BAA-332, Hydrocarboniphaga effusa str. AP103, Hydrocarboniphaga effusa strain AP103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.