STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MB02_02460Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
MB02_07480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.808
MB02_11930
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
MB02_01615
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
MB02_02465
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.757
MB02_02450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.756
MB02_16515
3-oxoacyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
MB02_02455
Haloalkane dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.674
MB02_16850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.673
MB02_09695
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.671
MB02_10095
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
Your Current Organism:
Altererythrobacter sp. MHB5
NCBI taxonomy Id: 1172626
Other names: A. sp. MH-B5, Altererythrobacter sp. MH-B5
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.