STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY91609.1ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter. (281 aa)    
Predicted Functional Partners:
AFY91608.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
 0.998
AFY95607.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
 0.997
AFY95610.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
  
 
0.924
AFY93436.1
Hypothetical protein.
  
  
 0.609
AFY93713.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.609
AFY94670.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
 
  
 0.568
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.511
AFY91600.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.489
AFY91606.1
PFAM: Acyltransferase family.
  
    0.457
AFY92098.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
     
 0.445
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.