STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY91890.1Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies). (129 aa)    
Predicted Functional Partners:
AFY95002.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.775
AFY96675.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.775
AFY92070.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.774
AFY94044.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.764
AFY93630.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.759
AFY91889.1
Periplasmic component of amino acid ABC-type transporter/signal transduction system; PFAM: Bacterial extracellular solute-binding proteins, family 3.
       0.603
AFY94469.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.458
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.