STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY92271.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
AFY93207.1
Chlorophyllase.
  
     0.597
AFY92269.1
Putative conserved small protein.
       0.539
AFY92270.1
PFAM: Phage derived protein Gp49-like (DUF891).
       0.539
psbL
PsbL protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
  
     0.533
AFY92267.1
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake; PFAM: DNA recombination-mediator protein A.
  
     0.518
AFY92056.1
PFAM: Putative integral membrane protein (DUF2391); TIGRFAM: putative integral membrane protein TIGR02587.
  
     0.473
AFY93835.1
Hypothetical protein.
  
     0.450
AFY94402.1
Hypothetical protein.
  
     0.420
AFY92057.1
TIGR02588 family protein; PFAM: Protein of unknown function (DUF2393); TIGRFAM: TIGR02588 family protein.
  
     0.411
AFY93839.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.