STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY92587.1Type IV secretory pathway, VirD4 component. (671 aa)    
Predicted Functional Partners:
AFY92588.1
Hypothetical protein.
       0.773
AFY92932.1
Hypothetical protein.
 
  
 0.766
AFY92764.1
Hypothetical protein.
 
  
 0.765
AFY94744.1
PFAM: Patatin-like phospholipase; Protein of unknown function (DUF3376); TIGRFAM: patatin-related protein.
  
 
   0.615
AFY93105.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
   
 0.587
AFY92586.1
Hypothetical protein.
       0.581
AFY92584.1
PFAM: ATPase family associated with various cellular activities (AAA).
       0.566
AFY92585.1
Hypothetical protein.
       0.566
AFY95325.1
PFAM: Protein of unknown function (DUF2993).
  
     0.536
AFY92056.1
PFAM: Putative integral membrane protein (DUF2391); TIGRFAM: putative integral membrane protein TIGR02587.
  
     0.528
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.