STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY92635.1PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family. (247 aa)    
Predicted Functional Partners:
AFY92634.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
 
 
 0.963
AFY91410.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.956
AFY91446.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.955
AFY94023.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
 
 
 0.847
AFY92111.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
 
 
 0.846
AFY93399.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
 
 
 0.841
AFY92005.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
 
 0.743
AFY91318.1
Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.736
AFY93401.1
PFAM: HlyD family secretion protein; TIGRFAM: ABC exporter membrane fusion protein, DevB family.
 
 
 0.723
AFY92636.1
TIGRFAM: ABC exporter membrane fusion protein, DevB family.
 
 
 0.697
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.