STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY92658.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (405 aa)    
Predicted Functional Partners:
AFY92660.1
Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.727
AFY93534.1
PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.666
AFY92659.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF1972).
 
    
0.645
AFY94721.1
Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); PFAM: Prokaryotic cytochrome b561.
  
     0.578
AFY92186.1
Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); PFAM: Prokaryotic cytochrome b561.
  
     0.558
AFY92667.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
  
    0.557
AFY96789.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.550
AFY95216.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.547
AFY93039.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.545
AFY92662.1
PFAM: Glycosyl transferase family 2.
 
    0.525
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.