STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY92928.1Hypothetical protein. (909 aa)    
Predicted Functional Partners:
AFY92929.1
Hypothetical protein.
       0.773
AFY91546.1
PFAM: Poly(A) polymerase central domain; Endonuclease/Exonuclease/phosphatase family.
  
    0.760
AFY92932.1
Hypothetical protein.
 
     0.664
AFY92930.1
Hypothetical protein.
       0.648
AFY93550.1
Putative phosphatase, C-terminal domain of histone macro H2A1 like protein; PFAM: Macro domain.
  
     0.619
AFY96736.1
PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase.
  
    0.618
AFY94066.1
Hypothetical protein.
  
     0.608
AFY92924.1
Type IV secretory pathway, VirD4 component.
 
     0.592
AFY92825.1
Integrase family protein; PFAM: TnsA endonuclease N terminal; Mu transposase, C-terminal; Integrase core domain.
  
     0.588
AFY91354.1
Integrase family protein; PFAM: TnsA endonuclease N terminal; Mu transposase, C-terminal; Integrase core domain.
  
     0.585
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.