STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93140.1PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457). (353 aa)    
Predicted Functional Partners:
AFY91762.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.710
AFY92188.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.710
AFY92395.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.710
AFY92556.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.710
AFY93141.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.710
AFY96049.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.710
AFY93139.1
PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.
  
  
 0.606
AFY93129.1
Hypothetical protein.
 
     0.561
AFY93132.1
Putative ATPase; Manually curated.
 
     0.549
AFY93137.1
PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG.
       0.545
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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