STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93196.1SufE protein probably involved in Fe-S center assembly; PFAM: Fe-S metabolism associated domain. (149 aa)    
Predicted Functional Partners:
AFY93197.1
Putative GTPase, G3E family; PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain.
       0.760
AFY91531.1
Cysteine desulfurase-like protein, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.753
AFY93916.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily.
 
 
 0.744
AFY93198.1
Putative GTPase, G3E family; PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain.
       0.724
AFY91529.1
PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
 
 
 0.690
AFY94687.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
  
 
 0.690
AFY95277.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
  
 
 0.690
AFY91525.1
FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 
 0.670
AFY91530.1
FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 
 0.576
folE
PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I.
       0.567
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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