STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93209.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
AFY96364.1
Putative esterase; PFAM: Uncharacterised protein family (UPF0227).
  
     0.505
AFY92148.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Heme NO binding associated; His Kinase A (phosphoacceptor) domain.
 
      0.462
AFY93210.1
Hypothetical protein.
       0.460
AFY93514.1
PFAM: Protein of unknown function (DUF2993).
  
     0.433
AFY94566.1
GAF domain-containing protein; PFAM: GAF domain.
 
     0.431
AFY92129.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548.
  
     0.426
AFY94531.1
PAS domain S-box; PFAM: Histidine kinase; CheB methylesterase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 
 0.424
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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