STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93452.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (330 aa)    
Predicted Functional Partners:
AFY96419.1
Hypothetical protein.
  
     0.729
AFY92062.1
PFAM: Ycf66 protein N-terminus.
  
     0.716
AFY96439.1
Chemotaxis protein histidine kinase-like protein; PFAM: Hpt domain.
  
     0.645
AFY95819.1
Hypothetical protein; PFAM: YCII-related domain.
  
     0.633
AFY94652.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
  
     0.604
AFY93937.1
Hypothetical protein.
  
     0.603
AFY95542.1
Hypothetical protein.
  
     0.599
AFY94486.1
Hypothetical protein.
  
     0.591
AFY92244.1
Origin recognition complex, subunit 2; PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.560
AFY95999.1
Hypothetical protein.
  
    0.543
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.