STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93528.1PFAM: Glycosyltransferase family 28 C-terminal domain. (421 aa)    
Predicted Functional Partners:
AFY93531.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
     0.728
AFY93530.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
     0.629
AFY93529.1
PFAM: Glycosyltransferase family 28 C-terminal domain.
 
    
0.564
AFY92764.1
Hypothetical protein.
  
     0.495
AFY92932.1
Hypothetical protein.
  
     0.492
AFY93522.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.491
AFY93534.1
PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
 
     0.480
AFY93883.1
PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
  
     0.423
AFY95703.1
Putative calcium-binding protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
     0.405
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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