STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93735.1PFAM: Protein of unknown function (DUF3727); Protein of unknown function (DUF1292). (187 aa)    
Predicted Functional Partners:
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.796
AFY95924.1
PFAM: Hypothetical chloroplast protein Ycf34.
  
     0.772
AFY96053.1
Hypothetical protein.
  
     0.772
AFY96340.1
PFAM: Domain of unknown function (DUF1825).
  
     0.772
AFY94731.1
PFAM: Protein of unknown function (DUF3288).
  
     0.771
AFY94780.1
Hypothetical protein.
  
     0.771
cpcS-3
CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.771
rpoZ
DNA-directed RNA polymerase, subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.770
AFY93715.1
PFAM: Protein of function (DUF2518).
  
     0.769
AFY91493.1
PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.767
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.