STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93840.1Putative hydrocarbon binding protein (contains V4R domain). (158 aa)    
Predicted Functional Partners:
AFY93839.1
Hypothetical protein.
       0.496
AFY94586.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
  
  
 0.481
AFY95846.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
  
  
 0.481
AFY95878.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
  
  
 0.481
AFY96154.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2344); Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; radical SAM-linked protein.
  
  
 0.481
AFY93841.1
Putative membrane-associated protein; PFAM: SNARE associated Golgi protein.
       0.410
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.