STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY93925.1Putative membrane protein; PFAM: Vitamin K epoxide reductase family. (315 aa)    
Predicted Functional Partners:
AFY95114.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide.
  
 
 
 0.784
AFY94904.1
Hypothetical protein.
  
     0.771
AFY95188.1
Putative integral membrane protein; PFAM: YGGT family.
  
     0.768
AFY96148.1
Putative membrane protein; PFAM: NnrU protein.
 
     0.767
AFY95157.1
PFAM: Protein of unknown function (DUF3464).
  
     0.763
AFY91765.1
PFAM: Protein of unknown function (DUF3007).
  
    0.761
AFY96215.1
Hypothetical protein.
  
     0.758
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
     0.757
psaL
PFAM: Photosystem I reaction centre subunit XI.
  
     0.753
AFY96239.1
Hypothetical protein.
  
    0.753
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.