STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94139.1PFAM: Trehalase. (509 aa)    
Predicted Functional Partners:
AFY94136.1
Malto-oligosyltrehalose trehalohydrolase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase.
  
 
 0.953
AFY94872.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.799
AFY91556.1
PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
 
 
  
 0.644
AFY94137.1
Malto-oligosyltrehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase.
 
  
 0.639
AFY92607.1
PFAM: Lipoxygenase.
   
  
 0.598
AFY94138.1
Hypothetical protein.
       0.581
glk
PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
     
 0.523
AFY92482.1
PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
  
  
 0.520
AFY92400.1
Beta-phosphoglucomutase; PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase family hydrolase; beta-phosphoglucomutase.
  
 
 0.428
AFY94901.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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