STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94285.1PFAM: Dynamin family. (826 aa)    
Predicted Functional Partners:
AFY96705.1
Putative bile acid beta-glucosidase; PFAM: beta-Glucocerebrosidase 2 N terminal; Protein of unknown function, DUF608.
  
 
 0.817
AFY96692.1
Hypothetical protein.
  
  
 0.653
AFY94808.1
Hypothetical protein.
  
     0.609
AFY92244.1
Origin recognition complex, subunit 2; PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.579
AFY93825.1
Alpha/beta hydrolase family protein.
  
   0.578
AFY94168.1
Hypothetical protein.
  
     0.566
AFY94086.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48.
  
  
 0.561
AFY92153.1
PFAM: Protein of unknown function (DUF3131).
  
     0.521
AFY94643.1
Hypothetical protein.
  
     0.513
AFY93850.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.