STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94350.1PFAM: Protein of unknown function (DUF820). (221 aa)    
Predicted Functional Partners:
AFY91905.1
PFAM: Protein of unknown function (DUF820).
  
     0.750
AFY94284.1
PFAM: Protein of unknown function (DUF820).
  
     0.718
AFY93994.1
PFAM: Protein of unknown function (DUF820).
  
     0.710
AFY94351.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
       0.678
AFY91335.1
PFAM: Protein of unknown function (DUF820).
  
     0.667
AFY91513.1
PFAM: Protein of unknown function (DUF820).
  
     0.666
AFY92297.1
Molecular chaperone GrpE (heat shock protein).
  
     0.665
AFY91527.1
PFAM: Protein of unknown function (DUF820).
  
     0.640
AFY91994.1
Hypothetical protein.
  
     0.615
AFY94348.1
Hypothetical protein.
       0.592
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.