STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94390.1PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system. (509 aa)    
Predicted Functional Partners:
AFY94391.1
ABC-type proline/glycine betaine transport system, ATPase component; PFAM: ABC transporter.
 0.999
AFY95692.1
ABC-type phosphate transport system, periplasmic component; PFAM: Domain of unknown function (DUF2382); TIGRFAM: conserved domain.
 
  
 0.618
AFY92100.1
Transcriptional regulator; PFAM: MarR family.
  
  
 0.522
AFY92113.1
Transcriptional regulator; PFAM: MarR family.
  
  
 0.522
AFY92178.1
Transcriptional regulator; PFAM: MarR family.
  
  
 0.522
AFY94872.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
    0.522
AFY96743.1
Transcriptional regulator; PFAM: MarR family.
  
  
 0.522
AFY95997.1
PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative.
     
 0.461
AFY96099.1
TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.
    
  0.456
AFY95715.1
ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
     
 0.452
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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