STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94612.1Phycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, beta subunit. (172 aa)    
Predicted Functional Partners:
AFY94777.1
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 
 0.933
AFY94611.1
Phycocyanin, alpha subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, alpha subunit.
 
 
   0.931
AFY92018.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.926
AFY92084.1
PFAM: Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.883
AFY94323.1
PFAM: Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.883
AFY93901.1
PFAM: Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.847
AFY92497.1
Phycocyanin, alpha subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, alpha subunit.
  
 
   0.843
AFY94610.1
PFAM: PBS lyase HEAT-like repeat.
 
     0.837
AFY95031.1
PFAM: Phycobilisome Linker polypeptide; CpcD/allophycocyanin linker domain; Belongs to the phycobilisome linker protein family.
  
 
 
 0.835
AFY95032.1
PFAM: Phycobilisome Linker polypeptide; CpcD/allophycocyanin linker domain; Belongs to the phycobilisome linker protein family.
  
 
 
 0.835
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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