STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94719.1Putative serine esterase (DUF676). (232 aa)    
Predicted Functional Partners:
AFY94718.1
TIGRFAM: DNA binding domain, excisionase family.
       0.697
AFY91574.1
Cell division septal protein; PFAM: POTRA domain, FtsQ-type.
  
     0.569
psbX
Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.548
AFY94355.1
Putative permease; PFAM: Membrane transport protein.
 
     0.530
AFY91707.1
PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.
  
     0.514
AFY94427.1
Hypothetical protein.
  
     0.470
AFY94720.1
KWG repeat protein; PFAM: KWG Leptospira.
       0.458
AFY91383.1
ATP-dependent Zn protease; PFAM: ATPase family associated with various cellular activities (AAA).
  
     0.445
rpmA
PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.440
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
   0.438
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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