STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94862.1Putative metal-binding protein; PFAM: Protein of unknown function (DUF1636). (137 aa)    
Predicted Functional Partners:
AFY94861.1
Hypothetical protein.
       0.773
AFY94308.1
DGQHR domain-containing protein; TIGRFAM: DGQHR domain.
  
     0.565
AFY96119.1
Hypothetical protein.
  
     0.514
AFY94734.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.507
AFY94229.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
  
     0.471
AFY91383.1
ATP-dependent Zn protease; PFAM: ATPase family associated with various cellular activities (AAA).
  
     0.448
AFY92229.1
PFAM: Precorrin-8X methylmutase.
 
     0.447
AFY92546.1
Hypothetical protein.
  
     0.419
AFY92999.1
Precorrin isomerase; PFAM: MerR family regulatory protein; Precorrin-8X methylmutase.
 
     0.416
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.