STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY94901.1Hypothetical protein. (243 aa)    
Predicted Functional Partners:
AFY94902.1
Hypothetical protein.
       0.664
AFY96110.1
DNA repair photolyase.
  
     0.622
AFY92376.1
Hypothetical protein.
  
     0.607
AFY93516.1
Hypothetical protein.
  
     0.596
AFY92629.1
PFAM: Predicted membrane protein (DUF2254).
  
     0.519
AFY93513.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
  
     0.497
AFY96112.1
Hypothetical protein; PFAM: Hemerythrin HHE cation binding domain.
  
     0.489
AFY91615.1
PFAM: Fatty acid desaturase.
  
     0.466
AFY93512.1
Putative integral membrane protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.460
AFY95442.1
PFAM: Fatty acid desaturase.
  
     0.444
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.