STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
pcyAPhycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (247 aa)    
Predicted Functional Partners:
AFY94860.1
PFAM: Heme oxygenase.
 
  
 0.932
AFY93519.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
     
 0.915
AFY95026.1
15,16-dihydrobiliverdin:ferredoxin oxidoreductase; PFAM: Ferredoxin-dependent bilin reductase; Belongs to the HY2 family.
     
0.914
pcyA-2
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
  
 
0.902
AFY96756.1
Hypothetical protein.
  
     0.774
AFY93696.1
PFAM: Protein of unknown function (DUF3110).
  
     0.773
AFY94904.1
Hypothetical protein.
  
     0.773
AFY96340.1
PFAM: Domain of unknown function (DUF1825).
  
     0.773
AFY95752.1
Hypothetical protein.
  
     0.772
AFY91341.1
Putative flavoprotein; PFAM: Metallo-beta-lactamase superfamily; Flavin reductase like domain.
  
     0.762
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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