STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY95141.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
AFY92891.1
DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
    
 0.767
AFY96705.1
Putative bile acid beta-glucosidase; PFAM: beta-Glucocerebrosidase 2 N terminal; Protein of unknown function, DUF608.
    
 0.646
AFY91780.1
Leucine Rich Repeat (LRR)-containing protein.
 
      0.632
AFY95142.1
Transposase family protein; PFAM: Transposase DDE domain.
       0.563
AFY91677.1
PFAM: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP).
    
  0.488
AFY95509.1
PFAM: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP).
    
  0.488
AFY92157.1
PAS domain S-box; PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 0.472
AFY92911.1
Leucine Rich Repeat (LRR)-containing protein.
 
      0.428
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.