STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY95872.1PFAM: Predicted membrane protein (DUF2157). (483 aa)    
Predicted Functional Partners:
AFY95873.1
Putative membrane-anchored protein.
 
     0.898
AFY95862.1
Hypothetical protein.
  
     0.624
AFY92999.1
Precorrin isomerase; PFAM: MerR family regulatory protein; Precorrin-8X methylmutase.
  
     0.574
AFY94318.1
PFAM: Protein of unknown function, DUF393.
  
     0.525
AFY92007.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
  
     0.505
AFY92229.1
PFAM: Precorrin-8X methylmutase.
  
     0.483
AFY94889.1
PFAM: Dynamin family.
  
     0.477
AFY93382.1
Transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.469
AFY91436.1
Hypothetical protein.
  
     0.465
AFY94376.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.452
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.