STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
AFY95963.1Putative photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. (332 aa)    
Predicted Functional Partners:
AFY95964.1
PFAM: Rubredoxin; Belongs to the rubredoxin family.
 
   
 0.849
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
   
 0.817
AFY95114.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide.
  
   
 0.815
AFY95157.1
PFAM: Protein of unknown function (DUF3464).
  
   
 0.815
AFY91567.1
PsaD; PFAM: PsaD.
  
   
 0.810
thf1
Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis.
  
   
 0.769
AFY91765.1
PFAM: Protein of unknown function (DUF3007).
  
     0.768
AFY95888.1
PFAM: Protein of unknown function (DUF1092).
  
     0.761
AFY95754.1
Lysophospholipase; PFAM: Protein of unknown function (DUF1350).
  
     0.757
AFY95533.1
PFAM: Photosystem I reaction centre subunit III.
  
     0.754
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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