STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY95989.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
AFY96253.1
Hypothetical protein.
  
     0.775
AFY96131.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
     0.756
AFY95230.1
Hypothetical protein; PFAM: DUF218 domain.
  
     0.748
AFY95385.1
Hypothetical protein.
  
     0.745
AFY94389.1
PFAM: Orange carotenoid protein, N-terminal; Belongs to the orange carotenoid-binding protein family.
  
     0.737
AFY91326.1
Organic solvent tolerance protein OstA; PFAM: Protein of unknown function (DUF3769); Protein of unknown function (DUF1239).
  
     0.735
AFY96776.1
PFAM: Domain of unknown function (DUF1816).
  
     0.732
AFY91575.1
PFAM: Protein of unknown function (DUF1239).
  
     0.728
AFY94935.1
PFAM: Protein of unknown function (DUF3153).
  
     0.726
AFY91456.1
TIGRFAM: photosystem II protein PsbQ.
  
     0.725
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.