STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY96099.1TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein. (316 aa)    
Predicted Functional Partners:
AFY96098.1
ABC-type phosphate/phosphonate transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.993
AFY96097.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE.
 
 
 0.982
AFY94187.1
V8-like Glu-specific endopeptidase; PFAM: Trypsin.
   
    0.702
AFY91562.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
  
 0.476
AFY94390.1
PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system.
    
  0.456
AFY92239.1
PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.447
AFY93680.1
PFAM: Protein of unknown function (DUF1838).
  
     0.421
AFY93707.1
TIGRFAM: phosphate ABC transporter, phosphate-binding protein; Belongs to the PstS family.
   
 
 0.417
AFY94101.1
TIGRFAM: phosphate ABC transporter, phosphate-binding protein; Belongs to the PstS family.
   
 
 0.417
AFY92028.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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