STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11422.1Hypothetical protein; PFAM: Prokaryotic cytochrome b561; KEGG: mar:MAE_57100 hypothetical protein; SPTR: Similar to tr|Q7NE00|Q7NE00. (235 aa)    
Predicted Functional Partners:
ccsA
Cytochrome c biogenesis protein ccsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
  
 0.748
AFZ11423.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: cyj:Cyan7822_5968 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein.
       0.491
AFZ11421.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: amr:AM1_4875 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative; SPTR: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative.
       0.476
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
  
  
 0.400
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.