STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11604.1PFAM: Leucine Rich Repeat; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR001611:IPR003591; KEGG: cte:CT1526 Rab family protein; PFAM: Leucine-rich repeat; SPTR: Leucine Rich Repeat domain protein. (382 aa)    
Predicted Functional Partners:
AFZ11581.1
Small GTP-binding protein; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR001611:IPR003591; KEGG: ter:Tery_3798 small GTP-binding protein; SPTR: Small GTP-binding protein.
 
     0.688
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.