STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11768.1PFAM: MltA specific insert domain; 3D domain; COGs: COG2821 Membrane-bound lytic murein transglycosylase; InterPro IPR005300:IPR010611; KEGG: cyj:Cyan7822_2912 MltA domain-containing protein; PFAM: Lytic transglycosylase MltA; 3D; SMART: Lytic transglycosylase MltA; SPTR: MltA N-terminal domain family; manually curated. (395 aa)    
Predicted Functional Partners:
AFZ11769.1
PFAM: Protein of unknown function (DUF3754); KEGG: cyt:cce_0057 hypothetical protein; SPTR: Putative membrane protein.
       0.741
AFZ11770.1
PFAM: StbA protein; COGs: COG0443 Molecular chaperone; KEGG: npu:Npun_F3664 hypothetical protein; SPTR: Putative uncharacterized protein; Belongs to the heat shock protein 70 family.
     
 0.464
AFZ11894.1
PFAM: Domain of unknown function (DUF1816); InterPro IPR014945; KEGG: ana:alr1160 hypothetical protein; PFAM: Protein of unknown function DUF1816; SPTR: Alr1160 protein.
  
     0.460
dapL
LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
       0.439
AFZ14078.1
KEGG: ava:Ava_4934 transmembrane transcriptional regulator (anti-sigma factor); SPTR: Putative uncharacterized protein.
  
     0.420
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.