STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11993.1HAD superfamily (subfamily IA) hydrolase, TIGR01548; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; COGs: COG0546 phosphatase; InterPro IPR006438:IPR005834; KEGG: npu:Npun_R4410 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, hypothetical 1. (280 aa)    
Predicted Functional Partners:
AFZ11994.1
PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: ava:Ava_1451 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein.
 
     0.836
AFZ11995.1
Heme exporter protein CcmA; PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR005895:IPR003439; KEGG: ana:alr0077 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Heme ABC exporter, ATP-binding protein CcmA, putative; TIGRFAM: ABC transporter, haem export, CcmA.
 
     0.810
AFZ11133.1
KEGG: cyh:Cyan8802_0743 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.668
AFZ11804.1
KEGG: cyp:PCC8801_3428 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.647
AFZ11992.1
30S ribosomal protein 3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.635
AFZ12793.1
KEGG: npu:Npun_R4658 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.612
AFZ15210.1
KEGG: ter:Tery_2796 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.605
AFZ11735.1
KEGG: npu:Npun_R0316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
AFZ11089.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
     0.581
AFZ12312.1
KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.549
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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