STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ12217.1PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: ana:alr1753 hypothetical protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: Alr1753 protein. (465 aa)    
Predicted Functional Partners:
AFZ11249.1
PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: cyc:PCC7424_0621 peptidase U62 modulator of DNA gyrase; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: TldD/PmbA family.
  
     0.690
AFZ12218.1
Protein of unknown function DUF1745; PFAM: FIST C domain; FIST N domain; COGs: COG4398 conserved hypothetical protein; InterPro IPR013702:IPR019494; KEGG: ter:Tery_3390 hypothetical protein; PFAM: FIST domain, N-terminal; FIST C domain; SMART: FIST domain, N-terminal; SPTR: Putative uncharacterized protein.
       0.426
AFZ13013.1
PFAM: Heavy-metal-associated domain; InterPro IPR006121; KEGG: ana:asr7638 hypothetical protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein.
  
     0.411
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.