STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ12435.1PFAM: HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: cyc:PCC7424_3306 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease. (424 aa)    
Predicted Functional Partners:
AFZ11645.1
Peptidase C14 caspase catalytic subunit p20; PFAM: Caspase domain; PGAP1-like protein; InterPro IPR011600:IPR012908; KEGG: npu:Npun_R3338 peptidase C14, caspase catalytic subunit P20; PFAM: Peptidase C14, caspase catalytic; PGAP1-like; SPTR: Putative uncharacterized protein.
  
     0.713
AFZ12436.1
COGs: COG1199 Rad3-related DNA helicase; KEGG: npu:Npun_F5207 putative ATP-dependent DNA helicase DinG; SPTR: Putative uncharacterized protein.
       0.543
AFZ11334.1
Transposase; COGs: COG5421 Transposase; KEGG: mar:MAE_26870 transposase; SPTR: Transposase.
  
     0.524
AFZ11282.1
Transposase; COGs: COG5421 Transposase; KEGG: mar:MAE_24840 transposase; SPTR: Transposase.
  
     0.521
AFZ14403.1
InterPro IPR007409; KEGG: npu:Npun_R6476 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein.
 
     0.441
AFZ14859.1
KEGG: cyc:PCC7424_1907 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.429
AFZ11333.1
Transposase; KEGG: mar:MAE_25530 transposase; SPTR: Transposase.
  
     0.418
AFZ14593.1
KEGG: cyn:Cyan7425_3076 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.411
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.