STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ12480.1Carbonate dehydratase; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide (three repeats); COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR000894:IPR001451; KEGG: cyj:Cyan7822_2897 carbonate dehydratase; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide repeat; PRIAM: Carbonate dehydratase; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Carbonate dehydratase. (550 aa)    
Predicted Functional Partners:
cbbL
Ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
  
 
 0.988
AFZ12481.1
PFAM: Bacterial transferase hexapeptide (three repeats); InterPro IPR001451; KEGG: ava:Ava_4468 hexapaptide repeat-containing transferase; SPTR: Transferase hexapeptide repeat protein.
 
 
 
 0.987
AFZ12237.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.983
AFZ13001.1
Hypothetical protein; PFAM: Carbonic anhydrase; InterPro IPR006311; KEGG: syn:sll0732 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.983
AFZ14536.1
PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR006311:IPR001765; KEGG: npu:Npun_F3687 carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; SPTR: Carbonic anhydrase.
    
 
 0.983
AFZ14963.1
PFAM: Ribulose bisphosphate carboxylase, small chain; COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894; KEGG: syp:SYNPCC7002_A1796 ribulose bisphosphate carboxylase, small subunit; PFAM: Ribulose bisphosphate carboxylase, small chain; PRIAM: Ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose-bisphosphate carboxylase.
    
 
 0.925
AFZ14127.1
PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: npu:Npun_F5001 hexapaptide repeat-containing transferase; SPTR: Bacterial transferase hexapeptide repeat protein.
  
 
 
 0.817
AFZ12474.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ter:Tery_0347 CO2 hydration protein; PFAM: CO2 hydration; SPTR: CO2 hydration protein; TIGRFAM: CO2 hydration; manually curated.
  
   
 0.744
AFZ12479.1
PFAM: Ethanolamine utilisation protein EutN/carboxysome; COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: ter:Tery_3850 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
   
 
 0.744
AFZ13465.1
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ana:asr0773 hypothetical protein; PFAM: Mo-dependent nitrogenase, C-terminal; SPTR: Asr0773 protein.
  
     0.740
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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