STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ12623.1Hypothetical protein; KEGG: ddi:DDB_G0283263 BTB/POZ domain-containing protein; SPTR: BTB/POZ domain-containing protein. (322 aa)    
Predicted Functional Partners:
AFZ12624.1
Hypothetical protein.
       0.762
AFZ12625.1
Hypothetical protein.
       0.762
AFZ12626.1
Hypothetical protein.
       0.762
AFZ12627.1
Hypothetical protein.
       0.762
AFZ12630.1
Hypothetical protein; InterPro IPR004019; KEGG: cyj:Cyan7822_4519 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.752
AFZ11113.1
Sulfiredoxin; PFAM: ParB-like nuclease domain; COGs: COG5119 Uncharacterized protein contains ParB-like nuclease domain; InterPro IPR003115; KEGG: ava:Ava_0758 sulfiredoxin; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Asl4146 protein.
  
     0.670
AFZ12628.1
Hypothetical protein.
       0.619
AFZ14808.1
Glucosylceramidase; PFAM: beta-Glucocerebrosidase 2 N terminal; Protein of unknown function, DUF608; COGs: COG4354 bile acid beta-glucosidase; InterPro IPR006775; KEGG: cyh:Cyan8802_2263 glucosylceramidase; PRIAM: Glucosylceramidase; SPTR: Putative uncharacterized protein.
  
     0.602
AFZ11287.1
Ankyrin; InterPro IPR002110; KEGG: tca:655990 similar to CG4719-PA; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Putative uncharacterized protein.
  
     0.572
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
     0.485
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.