STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ12841.1Nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease homologue; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021; KEGG: ava:Ava_2776 nuclease (SNase-like); PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); SPTR: Nuclease (SNase domain protein). (201 aa)    
Predicted Functional Partners:
AFZ14836.1
Nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease homologue; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021; KEGG: npu:Npun_F1158 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); SPTR: Staphylococcal nuclease family protein, putative; manually curated.
  
     0.652
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.563
AFZ12842.1
KEGG: cyc:PCC7424_3023 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.561
AFZ15451.1
Transporter, CPA2 family; PFAM: Universal stress protein family; Sodium/hydrogen exchanger family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR006016; KEGG: npu:Npun_R4399 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; UspA; SPTR: Sodium/hydrogen exchanger; TC 2.A.37.
  
    0.422
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.