STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AFZ12969.1Thioredoxin domain-containing protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: ava:Ava_1747 thioredoxin-related; PFAM: Thioredoxin domain; SPTR: Thioredoxin-related protein; Belongs to the thioredoxin family. (113 aa)    
Predicted Functional Partners:
AFZ13854.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: npu:Npun_R3877 ferredoxin-dependent glutamate synthase GltB; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Conserved region in glutamate synthase family.
    
 
 0.717
AFZ11702.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: cyj:Cyan7822_2992 glutamate synthase (ferredoxin); PFAM: Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, central-C; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin).
    
 
 0.704
AFZ12998.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013766; KEGG: npu:Npun_F0195 thioredoxin domain-containing protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain protein.
 
   
 0.644
AFZ12480.1
Carbonate dehydratase; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide (three repeats); COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR000894:IPR001451; KEGG: cyj:Cyan7822_2897 carbonate dehydratase; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide repeat; PRIAM: Carbonate dehydratase; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Carbonate dehydratase.
    
   0.631
AFZ12970.1
PFAM: NnrU protein; COGs: COG4094 membrane protein; InterPro IPR009915; KEGG: ava:Ava_1748 NnrU; SPTR: NnrU.
       0.600
AFZ12968.1
PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003945:IPR001516:IPR001750:IPR002128; KEGG: ava:Ava_1746 NAD(P)H-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; NAD [...]
   
   0.449
AFZ13049.1
PFAM: Glutaredoxin; Redoxin; TIGRFAM: Glutaredoxin-family domain; COGs: COG0678 Peroxiredoxin; InterPro IPR011906:IPR013740:IPR002109; KEGG: ava:Ava_4981 glutaredoxin-like region; PFAM: Redoxin; Glutaredoxin; SPTR: Glutaredoxin-like region; TIGRFAM: Glutaredoxin domain.
   
 
 0.416
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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