STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ13043.1KEGG: ava:Ava_4162 hypothetical protein; SPTR: Putative uncharacterized protein. (291 aa)    
Predicted Functional Partners:
AFZ13042.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ava:Ava_4163 binding-protein dependent transport system inner membrane protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein.
       0.780
AFZ15021.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: TLC ATP/ADP transporter; COGs: COG3202 ATP/ADP translocase; InterPro IPR004155; KEGG: ter:Tery_0929 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT-like repeat domain protein.
  
     0.772
AFZ13688.1
KEGG: naz:Aazo_0033 heterocyst differentiation protein HetF; SPTR: Tetratricopeptide repeat domain protein.
  
     0.767
AFZ11142.1
KEGG: ava:Ava_3221 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ13241.1
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors; PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR003018:IPR001054:IPR000014; KEGG: ava:Ava_3735 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; PRIAM: Adenylate cyclase; SMART: GAF; PAS; Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase; TIGRFAM: PAS.
 
     0.763
AFZ14948.1
KEGG: npu:Npun_R5196 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
AFZ13954.1
KEGG: ana:all3850 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.748
AFZ13079.1
Cell wall hydrolase/autolysin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ana:alr1324 hypothetical protein; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase domain protein.
  
     0.747
AFZ14198.1
Protein serine/threonine phosphatase with GAF(s) sensor(s); PFAM: GAF domain; Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001789:IPR003018:IPR001932:IPR010822; KEGG: ava:Ava_0662 response regulator receiver (CheY) and GAF modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; GAF; SMART: Protein phosphatase 2C-like; Signal transduction response regulator, receiver domain; GAF; SPTR: Stage II spor [...]
  
     0.746
AFZ14825.1
KEGG: npu:Npun_R1356 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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